* Add unittests to cover uncovered code in MemoryManager ADEF_ and REF_ parsers.
* Remove the second production of the 'user_defined_type' target
because it is superfluous, and impossible to reach. This is
because the NAME token is defined as pattern : '[_a-zA-Z][_a-zA-Z0-9:]*'.
This pattern will always match a string of colon separated names.
Note that the NAME itoken is used for colon separated type-name as well as
colon separated variable names.
* Add a test to MM_declare_var_unittest that covers the HEX token in adef_parser.l.
* Add a unittest for MemoryManager_JSON_Intf.cpp.
* Tweak MM_JSON_Intf.cc to get better code-coverage.
* Fix formatting, grammar, and syntax
Additionally, a sentence that referenced something that isn't used anywhere was removed.
* Promote headers, Format stuff
Many headers were far too deep. In some cases, the highest header was h4. To correct this, the offending headers were promoted once or twice as appropriate. Minor formatting changes were made, too.
* Fixed an incorrect conversion constant.
* Update library dependency explanation
The old explanation was confusing and seemingly self contradicting in places. This new explanation aims to fix that.
Co-authored-by: Matthew Elmer <m.elmer@mailbox.org>
* Provide MonteCarloGenerate capability
Intermediate commit, this squash represents all of Isaac Reaves' work
during his Fall 2022 Pathways internship tour
[skip ci]
* TrickOps: Add phase, [min-max] range, and overhaul YAML verification
* Add new "phase:" mechanism to TrickOps Runs and Builds to support
project-specific constraints on build and run ordering
- phase defaults to zero if not specified and must be between -1000
and 1000 if given.
- jobs can now optionally be requested by their phase or phase range
- See trickops/README.md for details
* Add [min-max] notation capability to run: entries and compare: entries
- [min-max] ranges provide definition of a set of runs using a common
numbering scheme in the YAML file, greatly reducing YAML file size
for monte-carlo and other zero-padded run numbering use cases
- See trickops/README.md for details
* YAML parsing changes
- Overhaul the logic which verifies YAML files for the expected
TrickOps format. This is now done in TrickWorkflowYamlVerifier and
provides much more robust error checking than previous approach
- .yaml_requirements.yml now provides the required types, ranges, and
default values as applicable to expected entries in YAML files
- valgrind: is now an sub-option to run: entries, not its own section
Users should now list their runs normallly and define their flags in
in that run's valgrind: subsection
- parallel_safety is now a per-sim parameter and not global. Users
should move their global config to the sim layer
- self.config_errors is now a list of errors. Users should now
check for empty list when using instead of True/False
* Robustify the get_koviz_report_jobs unit test to work whether koviz
exists on PATH or not
* Adjust trickops.py to use the new phase and range features
- Make it more configurable on the command-line via argparse
- Move SIM_mc_generation tests into test_sims.yml
[skip ci]
* Code review and cleanup from PR #1389
Documentation:
* Adjust documentation to fit suggested symlinked approach. Also
cleaned up duplicate images and old documentation.
* Moved the verification section out of markdown and into a PDF since it
heavily leverages formatting not available in markdown.
* Clarify a couple points on the Darwin Trick install guide
* Update wiki to clarify that data recording strings is not supported
MCG Code:
* Replace MonteCarloVariableRandomNormal::is_near_equal with new
Trick::dbl_is_near from trick team
MCG Testing:
* Reduce the set of SIM_mc_generation comparisons. After discussion
the trick team, we are choosing to remove all comparisons to
verif_data/ which contain random-generated numbers since
these tests cannot pass across all supported trick platforms.
* Fix the wrong rule on exlcuding -Werror for Darwin builds
of SIM_mc_generation
* Remove data recording of strings in SIM_mc_generation
Trickops:
* Replace build_command with build_args per discussion w/ Trick team
Since we only support arguments to trick-CP, replace the build_command
yaml entry with build_args
* Disable var server connection by default in SingleRun if TrickWorkflow.quiet
is True
* Guard against multiple Job starts
* Remove SimulationJob inheritance layer since old monte-carlo wasn't
and never will be supported by TrickOps
* Ignore IOError raise from variable_server that looks like "The remote
endpoint has closed the connection". This appears to occur when
SingleRun jobs attempt to connect to the var server for a sim that
terminates very early
[skip ci]
* Adjust phasing of old/new MCG initialize functions
* Clarify failure message in generate_dispersions if new/old MC are both
used.
* Adjust the phasing order of MCG intialize method to be before
legacy MC initialized. Without this, monte-carlo dry run completes with
success before the check in generate_dispersions() can run
* Add -Wno-stringop-truncation to S_override.mk for SIM_mc_generation
since gcc 8+ warns about SWIG generated content in top.cpp
* Introduce MonteCarloGenerationHelper python class
This new class provides an easy-to-use interface for MCG sim-module
users:
1. Run generation
2. Getting an sbatch array job suitable for SLURM
3. Getting a list of SingleRun() instances for generated runs, to be
executed locally if desired
---------
Co-authored-by: Dan Jordan <daniel.d.jordan@nasa.gov>
* Add tests for alternate ways to open VS port
* Don't connect to varserv when quiet=true in trickops
* Add print to try to help debug hanging trickops test
* Handle multicast connect failures gracefully
* Multicast is disabled by default on mac
* Forgot an important return value
* Take away retries
* Fix issue with restart test
* Revert trickops debugging changes
* Remove debugging accidentally left in [no ci]
* whoops
* Allow retries
* Update trickops.py
* sim test adjustments
* Add docs [no ci]
* wording [no ci]
* Cleanup
* Remove large messages, test that one in unit tests
Made a couple of changes in ICG source code to handle clang API differences. Encapsulated
differences in ifdefs. Added libclangSupport to ICG link line.
* Replace sprintf with snprintf in all of Trick source. #1384
* Don't add -Werror for MacOS because of deprecated sprintf warnings which we cant get rid of because SWIG. #1384
* Fixed an unbalanced parenthesis in S_overrides.mk. #1384
* add integration test sim SIM_exec_set_time_tic_value
* use temporary job pointer instead of modifying curr_job in exec_set_time_tic_value
closes#1372
* Add code-coverage make target and github actions workflow
* Upload coverage to coveralls
* Add coverage badge to readme
* Fix some test makefiles to correctly propagate flags
* Updates SIM_stl to include checkpoint writing and checkpoint restore, as well as adding more data structures to test
* Thoroughly tests supported STL types with MM_stl_checkpoint and MM_stl_restore
* Adds an option to enable or disable STL restore in accessible interfaces and changes default to true
* Updates documentation on STL checkpointing to clearly state limitations and known bugs
* Adds the send_once command and message type, which allows a user to request a variable to be sent immediately and only once (intended to replace the var_add, var_send, var_clear idiom that is commonly used for this purpose)
* Minor refactoring of variable server internals to reduce repeated code
* Adds SIM_test_varserv to integration test to test basic variable server functionality
* Changes graphics client for SIM_billiards to use var_send_once as an example of intended use
* Add documentation for var_send_once in docs and tutorial
* Set exit_code_enabled in trick unit tests to be true by default
* Patch for failing bookworm build
* Disambiguate python use #1250
Changed all calls to /usr/bin/python to /usr/bin/env python3. Removed execute permissions on a lot of files that are not executable.
closes#1250
* #1219 added code to check reference mod bit in ClassicCheckPointAgent::getCompositeSubReference, use reference width instead of size.
* #1219 refactor getCompositeSubReference for readability
* #1219 and #1223 add reference width to mod bits in ICG
* check for mod bits in TRICK_STRUCTURED section, refactor function
* #1219 adding MM_ref_name_from_address tests
* #1224 fix logic for offset into arrayed struct
closes#1219closes#1223closes#1224
Co-authored-by: Fennell, Scott P 263712616 <scott.p.fennell@nasa.gov>
* Fix ICG errors while processing system header files closes#1189
Found an InitPreprocessor call and am using it. Not sure which version
of clang it was added, just using for the version I'm on (10) and above.
Also found some GCC defines that are used during normal compilation.
Added these to our list of defines during ICG. This clears up all of
the errors I've been seeing.
* Fix ICG errors while processing system header files #1189
OK, found the flag that activates the ATOMIC defines I was previously
hardcoding.
* #1194 add trick-system-icg-exclude
Co-authored-by: Alex Lin <alexander.s.lin@nasa.gov>
* Fix ICG errors while processing system header files #1189
Found an InitPreprocessor call and am using it. Not sure which version
of clang it was added, just using for the version I'm on (10) and above.
Also found some GCC defines that are used during normal compilation.
Added these to our list of defines during ICG. This clears up all of
the errors I've been seeing.
* Fix ICG errors while processing system header files #1189
OK, found the flag that activates the ATOMIC defines I was previously
hardcoding.
* suppress warning for detached head during civitweb clone
closes#1180
* disable sigchld handler by default #931 (#1182)
* disable sigchld handler by default #931
* update test to set sigchld trap before testing
closes#931
* Fixed webserver http_alloc test (#1184)
Co-authored-by: cherpin00 <44306236+cherpin00@users.noreply.github.com>
ICG and make_makefile_swig create py_link_list and io_link_list files
listing the files to be linked during sim builds. Trickified projects
require slightly altered lists.
Fixes#1155
* #608 add implementation of FileSkipped callback to FindTrickICG to add include chains for headers that have already been preprocessed
* #608 add test SIM for FindTrickICG offsets SIM_test_icg_file_skipped
* #1119 allocate using memory manager
* #1119 replace void* vector with char* vector in external application
Co-authored-by: Fennell, Scott P 263712616 <scott.p.fennell@nasa.gov>
* check if default constructor is deleted #1094
* unit test icg deleted default constructor #1094
* Update centos 7 swig version to 3.0 to support deleted function in SIM_deleted_default_constructor test
Co-authored-by: Fennell, Scott P 263712616 <scott.p.fennell@nasa.gov>
closes#1094
