Root cause of intermittent DNS up/down alerts: Pi-hole's default
rate-limit (1000 queries/60s per client) was throttling Uptime Kuma
on the Cloudron VPS (tsys-cloudron, 100.107.35.78). Uptime Kuma sends
high-volume DNS queries to monitor dozens of hosts; when it exceeded
the limit, Pi-hole responded REFUSED, which Uptime Kuma detected as
DNS being down. This happened every 1-2 minutes.
Evidence: 40 rate-limiting events against 100.107.35.78 in recent
netinfra-01 Pi-hole logs. Also 10.53.0.1 (Docker bridge gateway) hit
4852 queries in a single 60s window.
Fix: Set dns.rateLimit.count=0 and dns.rateLimit.interval=0 on both
nodes (private tailnet, no DNS amplification risk). Also persisted in
docker-compose.yml via FTLCONF env vars.
Combined with prior IPv6 fix (4f82520), this resolves all known causes
of DNS flapping.
[#376]
2.7 KiB
netinfra/pihole/ — Pi-hole recursive DNS (pfv-netinfra-01/02)
Redmine: #376 (up/down alerts + commit hardening) · #357 (cluster build, closed)
Pi-hole v6 runs as the recursive resolver on port 53 of both DNS nodes.
Technitium (tsys-dns) runs as the authoritative server on port 5300; the two
share the dnsnet Docker network so Pi-hole can conditional-forward knel.net
zones to Technitium.
Hardening (defense-in-depth against gravity.db corruption)
The operator hit a production outage when Pi-hole's /dev/shm was too small,
corrupting gravity.db. The live config on both nodes now includes:
shm_size: 1024M— fixes the root cause (default 64M was too small).gravity-validate.sh— entrypoint that checks the SQLite header ofgravity.dbbefore start; auto-moves a corrupt/empty DB aside so Pi-hole can regenerate it cleanly.- Healthcheck —
dig +norecurse @127.0.0.1 pi.hole+ gravity.db non-empty; fails the container if DNS or the DB is broken. autohealsidecar — restarts any container labeledautoheal=truethat goes unhealthy.
Deploy
The compose reads the web UI password from a gitignored .env:
cd netinfra/pihole/
cp .env.example .env # then edit .env and set PIHOLE_WEB_PASSWORD
docker compose up -d
Files are deployed to /home/localuser/services/pihole/ on each node. Volumes
(./etc-pihole, ./etc-dnsmasq.d) hold the persistent state.
IPv6 disabled + Rate-limiting disabled
IPv6
Both netinfra nodes run IPv4-only. IPv6 is disabled at the kernel level
(/etc/sysctl.d/99-disable-ipv6.conf) because netinfra-01 has no IPv6 internet
route, and Pi-hole's default IPv6 upstream (Google 2001:4860:4860::8888) was
causing continuous "Network unreachable" errors + intermittent DNS failures
detected by Uptime Kuma. The upstream is now 8.8.8.8 (IPv4 only).
Rate-limiting
Pi-hole's default rate-limit (1000 queries / 60 seconds per client) was
the root cause of Uptime Kuma DNS flapping. Uptime Kuma runs on the
Cloudron VPS (tsys-cloudron, 100.107.35.78) and sends high-volume DNS
queries to monitor dozens of hosts. When it exceeded 1000 queries/60s,
Pi-hole responded with REFUSED, which Uptime Kuma detected as DNS being
down. Rate-limiting is now disabled (count=0, interval=0) since this is a
private tailnet with no risk of DNS amplification attacks.
Verify
dig @127.0.0.1 +short google.com # recursive
dig @127.0.0.1 +short git.knownelement.com # knel.net via Technitium forward
docker inspect pihole --format '{{.State.Health.Status}}'