#!/usr/bin/env perl

#==============================================================================
#
#         Name: start_sim 
#
#     Synopsis: start_sim -n <SIM_name> -i <RUN_directory_name>/<in_file>
#
#  Description: Run any simulation from any path
#
#  Assumptions: 1)  Must be a Trick installed user 
#
#     Examples: start_sim SIM_cannon RUN_test
#
#   Created By: Warwick Woodard, L-3 Communications 05/01/2008 
#
#==============================================================================

use lib $ENV{"TRICK_HOME"} . "/bin/pm" ;
use gte ;
#use strict ;
require $ENV{"TRICK_HOME"} . "/bin/pm/XML/Parser.pm" ;
use XML::Simple ;

my @element_stack;
my $record_index;
my $fh;
my $DATA_PATH;
my $INCLUDE_PATH;


my $usage="
Name:
    start_sim - run any simulation from any path
    
    Additional options from S_main_<host_cpu>.exe (above)
    are also available for use with start_sim.
       
    Options specific to start_sim command:
    (Note: start_sim can run without options)
        -s, -sim, -name  <SIM_name>
                name of trick directory system that holds the simulation
        -i, -input  <input_file>
                simulation input file to use
        -nexiom, -nexcsims  <XML_input_file>
                parse a NExIOM input file and generate a nexcsims.d data file,
                then auto load nexcsims.d after standard input file is read
        -user_home, -u  <USER_HOME_path>
                overwrite default value for the location of sims (full path)
        -freq  <#.##>
                overwrite data recording cycle time (>= 0.01 sec)
        -ddd, -debug
                start simulation using the data display debugger (DDD)
        -gdb
                start simulation using the GNU debugger
        -echo
                send start_sim script print statements to terminal
        -h, -help, --help
                display this help and exit
        
Usage:
    start_sim [-s <SIM_name>] [-i <input_file>] [option(s)...]
    
Examples:
    % start_sim -s SIM_cannon -i RUN_grav/input
    % start_sim
    % start_sim -O \$HOME/my_log_files/
    % start_sim -nexiom nexiom_input.xml
" ;


# Local Variables
my $name="";                # Name of Trick directory system that holds simulation
my $input="";               # Simulation Input File
my $use_input=1;            # Input file required for S_MAIN_*.exe
my $nexiom_format=0;        # Input file is in XML format, create XML output
my $nexiom_input="";        # Filename of the nexiom input parameters (XML format)
my $nexiom_output="";       # Filename of the nexiom output (Datatable format)
my $freq=0.0;               # Overwrite data recording rate (>= 0.01 sec)
my $user_home="";           # Overwrite default location of $TRICK_USER_HOME
my $echo_ON=0;              # Print the generated start command to screen
my $help=0;                 # Print usage text to screen
my $DDD=0;                  # Start simulation in ddd Flag
my $GDB=0;                  # Start simulation in gdb Flag
my $options="";             # Additional options to pass along to S_MAIN_*.exe
my $default_host_cpu="Linux_3.4_234_x86_64";# Given in case TRICK_HOST_CPU is undef


my $kernel_name;
open $fh, "uname -s |";
{
  local $/;
  $kernel_name = trim(<$fh>);  # remove whitespace
}
close $fh;
my $redirect="";
if  ( substr($kernel_name,0,4) eq "IRIX" ) {
    $redirect=" > /dev/null ";  # Redirect outputs away from the screen
}


# IMPORTANT: Do not create options that could be used by S_MAIN.exe
while ( @ARGV > 0 ) {
    my $argc  = $ARGV[0];  # Copy current argument
    my $argc2 = $ARGV[1];
    
    if (( $argc eq "-name" ) ||
        ( $argc eq "-sim" ) ||
        ( $argc eq "-s" )) {
        shift; $name=$argc2;
    } elsif (( $argc eq "-input" ) ||
             ( $argc eq "-i" ) ||
             ( $argc eq "-run" )) {
        shift; $input=$argc2;
    } elsif (( $argc eq "-frequency" ) ||
             ( $argc eq "-freq" ) ||
             ( $argc eq "-f" )) {
        shift; $freq=$argc2;
    } elsif (( $argc eq "-user_home" ) ||
             ( $argc eq "-user" ) ||
             ( $argc eq "-u" )) {
        shift; $user_home=$argc2;
    } elsif (( $argc eq "-debug" ) ||
             ( $argc eq "-ddd" )) {
        $DDD=1;
    } elsif (( $argc eq "-gdb" )) {
        $GDB=1;
    } elsif (( $argc eq "-echo" ) ||
             ( $argc eq "-print" )) {
        $echo_ON=1;
    } elsif (( $argc eq "-help" ) ||
             ( $argc eq "-h" ) ||
             ( $argc eq "help" ) ||
             ( $argc eq "-x" )) {
        $help=1;
        $options = $options." -help";
    } elsif (( $argc eq "-nexiom" ) ||
             ( $argc eq "-nexcsims" )) {
        $nexiom_format=1;
        shift;
        $nexiom_input=$argc2;
    } else {
        if  (( $argc eq "sie" ) ||
             ( $argc eq "trick_version" ) ||
             ( $argc eq "-V" ) ||
             ( $argc eq "--version" )) {
            # Don't run sim; generate files or print info to screen.
            $use_input = 0;
            # Save option.
            $options = $options." ".$argc;
        } elsif  ( substr($argc,0,1) eq "-" ) {
            # Add two backslashes to support Debug argument parsing.
            # Otherwise some arguments are saved as internal ddd/gdb
            # commands and not passed along to S_MAIN.exe
            $options = $options." ".$argc."\\\\";
        } else {
            # Leave argument as is and append to previous option(s).
            $options = $options." ".$argc;
        }
    }
    
    shift;
}


# Executable name is a product of host_cpu description.
my $S_MAIN_EXE;
if ( defined($ENV{"TRICK_HOST_CPU"}) ) {
    # Set "S_MAIN_EXE" equal to "S_main_" + the environment variable TRICK_HOST_CPU
    $S_MAIN_EXE = "S_main_".$ENV{"TRICK_HOST_CPU"} .".exe";  # concatenate strings
} else {
    # If TRICK_HOST_CPU is undef, then "S_MAIN_EXE" is equal to "S_main_" plus
    # local variable default_host_cpu (set above).
    $S_MAIN_EXE = "S_main_".$default_host_cpu .".exe";  # concatenate strings
}
if ( $echo_ON == 1 ) {
    print "debug: setting S_MAIN_EXE equal to \"$S_MAIN_EXE\"\n";
}


# If $user_home is not null, copy value
if ( $user_home ne "" ) {
    # If $user_home input is not null, test if path exists
    if ( ! -d $user_home ) {
        # An invalid sim path was provided; clear variable
        $user_home="";
    }
}

my $userid;
open $fh, "whoami |";
{
    local $/;
    $userid = trim(<$fh>);  # remove whitespace
}
close $fh;


my $trick_sims;
if ( $user_home ne "" ) {
    # Set "trick_sims" equal to the variable $user_home.
    $trick_sims = $user_home;
} elsif ( defined($ENV{"TRICK_USER_HOME"}) ) {
    # If $user_home not set, set "trick_sims" equal to the env var TRICK_USER_HOME.
    $trick_sims = $ENV{"TRICK_USER_HOME"};
} elsif ( defined($ENV{"HOME"}) ) {
    # If TRICK_USER_HOME is undef, then set "trick_sims" equal to $HOME/trick_sims.
    $trick_sims = $ENV{"HOME"}."/trick_sims";  # concatenate strings
} else {
    # If HOME is undefined then default "trick_sims" to /users/<userid>/trick_sims.
    $trick_sims = "/users/".$userid."/trick_sims";  # concatenate strings
}
if ( $echo_ON == 1 ) {
    print "debug: setting trick_sims equal to \"$trick_sims\"\n";
}


my $pwd_;
if ( defined($ENV{"PWD"}) ) {
    # Set "pwd_" equal to the envirnment variable PWD.
    $pwd_ = $ENV{"PWD"};
} elsif ( defined($ENV{"cwd"}) ) {
    # If PWD is undef, then set "pwd_" equal to the envirnment variable cwd.
    $pwd_ = $ENV{"cwd"};
} else {
    # If cwd is undefined, then execute `pwd`.
    open $fh, "pwd |";
    {
      local $/;
      $pwd_ = trim(<$fh>);  # remove whitespace
    }
    close $fh;
}


# which Simulation to use
# Possible Scenarios:
# 1. SIM_name was provided by user
# 2. SIM_name was not entered but current path is within a simulation directory
# 3. SIM_name was not entered & current path is not within any simulation dir
my $sim_="SIM";
if ( $name ne "" ) {
    # If $name is not null, copy value
    $sim_ = $name;
    if ( substr($name,0,1) eq "/" ) {
        # If the full path of the simulation directory was entered,
        # then separate into two parts
        my $last_slash = rindex($name, "\/");
        if ( -e substr($name,0,$last_slash) ) {
            # if path exists, copy all chars prior to the last forward slash
            $trick_sims = substr($name,0,$last_slash);
        }
        $sim_=substr($name,($last_slash+1));  # copy all chars after the last forward slash
    }
} elsif ( ($nexiom_format == 1)  &&  ($nexiom_input ne "") ) {
    # If $nexiom_input is not null, parse file
    $sim_ = process_nexiom_input( $nexiom_input, "name");
    if ( substr($sim_,0,1) eq "/" ) {
        # If the full path of the simulation directory was entered,
        # then separate into two parts
        my $last_slash = rindex($sim_, "\/");
        if ( -e substr($sim_,0,$last_slash) ) {
            # if path exists, copy all chars prior to the last forward slash
            $trick_sims = substr($sim_,0,$last_slash);
        }
        $sim_=substr($sim_,($last_slash+1));  # copy all chars after the last forward slash
    }
} else {
    # $name is null, search the current path to determine if
    # this script was executed within a simulation directory.
    # If not, default to the simulation directory with the
    # most recent time stamp.
    if  ( `echo $pwd_ | grep $sim_ $redirect` ) {
        # Script was executed within a Trick simulation directory
        my $last_slash = rindex($pwd_, $sim_) - 1;
        $trick_sims = substr($pwd_,0,$last_slash);  # Copy section of path PRIOR to SIM_name
        $sim_=substr($pwd_,($last_slash+1));  # Copy section of path AFTER trick_sims
        # Copy portion of SIM_name PRIOR to first slash (if any)
        # This would imply that the path of execution was nested
        # down past the simulation directory path
        if ( index($sim_, "\/") != -1 ) {
            my $new_slash = index($sim_, "\/");
            $sim_ = substr($sim_,0,$new_slash);
        }
    } else {
        # Script was executed outside of a Trick simulation directory
        # List, then sort (comma delimited) all SIM_names by mod time
        open $fh, "ls -vtmBd ".$trick_sims."/".$sim_."* ".$redirect." |";
        {
          local $/;
          $sim_ = trim(<$fh>);  # remove whitespace
        }
        close $fh;
        # Copy the single SIM_name PRIOR to the first comma (if any)
        if ( index($sim_, ",") != -1 ) {
            my $first_comma = index($sim_, ",");
            $sim_ = substr($sim_,0,$first_comma);
        }
        # Results show full path; 
        # strip off everything up to and including the last slash
        my $last_slash = rindex($sim_, "\/");
        $sim_=substr($sim_,($last_slash+1));  # copy all chars after the last forward slash
    }
}
my $NAME = $trick_sims."/".$sim_ ;
if ( $echo_ON == 1 ) {
    print "debug: setting NAME equal to \"$NAME\"\n";
}
if ( ! -e $NAME ) {
    print "\e[31mError:\e[00m SIM directory... \n\"$NAME\" \n...does not exists.\n";
    if ( $nexiom_format == 1 ) {
        print "         Please overwrite NExIOM value by adding \"-s <SIM_name>\"\n";
        print "         (e.g. \"start_sim -nexiom <XML_input_file> -s <SIM_name>\" )\n";
    }
    print "         \e[34mPlease set <SIM_name> to one of the following:\e[00m\n";
    system("ls -vtmBd ".$trick_sims."/*SIM*");
    print "Type \"start_sim -help\" for more info.\n";
    exit
}


# where to find S_default.dat
$DATA_PATH=$NAME;

# where to look for input file's #includes
$INCLUDE_PATH=$NAME;


# Which input file to use
# Possible Scenarios:
# 1. input_file was provided by user
# 2. input_file was not entered, but current path is within a RUN directory
# 3. input_file was not entered & current path is not within any RUN dir
my $run_ = "RUN";
my $in_ = "input";
if ( $input ne "" ) {
    # If $input is not null, copy value
    if ( `echo $input | grep "\/" $redirect ` ) {
        # A run directory AND input file name was provided
        my $last_slash = rindex($input, "\/");
        $run_ = substr($input,0,$last_slash);  # Copy section of path PRIOR to $input's last slash
        if ( rindex($run_, "\/") != -1 ) {
            my $new_slash = rindex($run_, "\/");
            $run_=substr($run_,($new_slash+1));  # Copy section of path AFTER $run_'s last slash
        }
        $in_=substr($input,($last_slash+1));  # Copy section of path AFTER $input's last slash
    } else {
        # A path was not provided, but an input file name was.
        $in_ = $input;
        if ( -e $input ) {
            # Assume that this script is being executed in the desired RUN dir.
            my $last_slash = rindex($pwd_, "\/");
            $run_=substr($pwd_,($last_slash+1));  # Copy section of path AFTER $pwd_'s last slash
        } else {
            # The input file does not exist in current working directory.
            # Search for it in the RUN directories with recent time stamps.
            # List, then sort (comma delimited) all RUN_names by mod time
            open $fh, "ls -vtmBd ".$NAME."/".$run_."* ".$redirect." |";
            {
              local $/;
              $run_ = trim(<$fh>);  # remove whitespace
            }
            close $fh;
            # Copy the single RUN_name PRIOR to the first comma (if any)
            if ( index($run_, ",") != -1 ) {
                my $first_comma = index($run_, ",");
                $run_ = substr($run_,0,$first_comma);
            }
            # Results show full path; strip off everything from first to last slash
            my $last_slash = rindex($run_, "\/");
            $run_=substr($run_,($last_slash+1));  # copy all chars after the last forward slash
        }
    }
} else {
    if  ( `echo $pwd_ | grep $run_ $redirect ` ) {
        my $name_slash = rindex($pwd_, $sim_);  # Find string index where simulation's name begins
        my $next_slash = index($pwd_, "\/", $name_slash);  # Find string index where simulation's name ends
        $run_=substr($pwd_,($next_slash+1));  # Copy section of path AFTER $NAME
        # Copy portion of results PRIOR to first slash (if any)
        # This would imply that the path of execution was nested
        # down past the RUN directory path
        if ( index($run_, "\/") != -1 ) {
            my $new_slash = index($run_, "\/");
            $run_ = substr($run_,0,$new_slash);
        }
    } else {
        # Script was executed outside of a RUN directory
        # List, then sort (comma delimited) all RUN_names by mod time
        open $fh, "ls -vtmBd ".$NAME."/".$run_."* ".$redirect." |";
        {
          local $/;
          $run_ = trim(<$fh>);  # remove whitespace
        }
        close $fh;
        # Copy the single RUN_name PRIOR to the first comma (if any)
        if ( index($run_, ",") != -1 ) {
            my $first_comma = index($run_, ",");
            $run_ = substr($run_,0,$first_comma);
        }
        # Results show full path; strip off everything from first to last slash
        my $last_slash = rindex($run_, "\/");
        $run_=substr($run_,($last_slash+1));  # copy all chars after the last forward slash
    }
}

my $INPUT="";
if ( $use_input == 0 ) {
    # Execute S_MAIN_*.exe without an input file (e.g. sie, --version, etc.)
} else {
    $INPUT=$NAME."/".$run_."/".$in_;
}
if ( $echo_ON  == 1 ) {
    print "debug: setting INPUT equal to \"$INPUT\"\n";
}
if ( (! -e $INPUT)  &&  ($use_input!=0) ) {
    print "\e[31mError:\e[00m Input file... \n\"$INPUT\" \n...is not a valid file name.\n";
    if ( $nexiom_format == 1 ) {
        print "         Please overwrite NExIOM value by adding \"-i <input_file>\"\n";
    }
    printf "         \e[34mPlease set <input_file> to a valid input file name\e[00m\n";
    printf "         \e[34mfrom one of the following directories:\e[00m\n";
    system("ls -vtmBd ".$NAME."/RUN*");
    print "Type \"start_sim -help\" for more info.\n";
    exit;
}


my $CMD = $NAME."/".$S_MAIN_EXE."  ".$INPUT."  ".$options ;
if ( ! -e $NAME."/".$S_MAIN_EXE ) {
    print "\n" ;
    print "\e[31mError: \"$S_MAIN_EXE\" does not exist.\e[00m\n";
    print "      \e[33mThe executable that you were expecting may not have \e[00m\n";
    print "      \e[33mbeen created yet, or maybe was created on a different \e[00m\n";
    print "      \e[33mplatform and will not run on this one.\n";
    print "File(s) Found:\n";
    print "\e[34m";
    system("ls -apv S_main_*");
    print "\e[00m";
    print "Try running CP, then start_sim again.\n\n";
    exit;
} else {
    if ( $help == 1 ) {
        # First print help info from S_main_*.exe.  Defined in file:
        # $TRICK_HOME/trick_source/sim_services/exec/process_sim_args.c
        system($NAME."/".$S_MAIN_EXE."  ".$options);
        # Now append start_sim specific help info.
        print "$usage\n";
        exit;
    } else {
        if ( $nexiom_format == 1 ) {
            $nexiom_output = process_nexiom_input( $nexiom_input );
            # strip off everything up to and including the last slash 
            my $last_slash = rindex($nexiom_output, "\/");
            $nexiom_output = substr($nexiom_output,($last_slash+1));
            if ( $echo_ON == 1 ) {
                #print "setting NExIOM output file to \"$nexiom_output\"\n";
            }
            #$CMD = $CMD." -auto -nexiom ".$nexiom_output;
            $CMD = $CMD." -auto -nexiom ";
        }
        if ( $DDD == 1 ) {
            # Prepend command with ddd
            $CMD = "ddd --args ".$CMD;
        } elsif ( $GDB == 1 ) {
            # Prepend command with gdb
            $CMD = "gdb --args ".$CMD;
        }
    }
}


# START THE SIM!!!
if ( $echo_ON == 1 ) {
    print "starting the simulation:\n";
    print "   \"$CMD\"\n\n";
}
system("cd ".$NAME."; ".$CMD);




#######################################################################
########################  DECLARE SUBROUTINES  ########################
#######################################################################
sub process_nexiom_input {

    # PARSE NExIOM INPUT FILE 
    my ($infile, $tag) ;
    my ($value, $outfile) ;
   
    # If two arguments received (input_filename, XML tag)
    if ( $_[1] ) {
        # save input_filename and XML tag strings
        ($infile, $tag) = handle_nexiom_args($_[0], $_[1]) ; 
    
    # One argument received (input_filename)
    } else {
        # save input_filename; XML tag is null
        ($infile, $tag) = handle_nexiom_args($_[0], 0) ; 
    }

    # If an XML tag was provided 
    if ( $tag ) {
       # Save the value of the first occurrence of this XML tag.
       $value = get_tag_val($infile, $tag) ;
       # This value is most commonly used as the NExIOM default SIM directory name.
       return $value;
       
    # No XML tag provided 
    } else {
       # Translate input file to "nexcsims.d"
       $outfile=generate_data_files($infile) ;
       return $outfile;
    }

}

sub handle_nexiom_args($$) {

    my ( $infile, $tag ) ;

    $infile  = $_[0] ;
    $tag  = $_[1] ;

    # Exit script if input_file does not exist 
    if ( ! -e $infile ) {
       print "ERROR: Can't find NExIOM input file \"$infile\" \n" ;
       print "File does not exist: $infile \n" ;
       exit
    }

    return $infile, $tag ;
}

sub get_tag_val($$) {

    my ( $file ) = $_[0] ;
    my ( $tag ) = $_[1] ;
    my $value ;

    # Parse XML contents to hashref, $data 
    my $data = XML::Simple::XMLin($file) ;
    # Find first occurrence of XML tag (i.e. <foo="bar">)
    if ( ! ($value = $data->{$tag}) ) {
        # Couldn't find this XML tag, so clear $value
        $value = "" ;
    }

    return $value ;
}

sub generate_data_files($) {
   
    my ( $file ) = $_[0] ;
    my $results;
    my $record_name;
    $record_index = 0;  # counter for the number of vars to data record
    
    # Save the value of the first occurrence of this XML tag.
    if ( ! ($results = get_tag_val($file,"results")) ) {
        # Couldn't find this XML tag, so provide default value
        $results = "nexiom_output.xml" ;
    }
    # strip off everything up to and including the last slash
    my $last_slash = rindex($results, "\/");
    $record_name=substr($results,($last_slash+1));  # copy all chars after the last forward slash

    # create/overwrite nexcsims.d data file
    open (FILE, ">".$DATA_PATH."/Modified_data/nexcsims.d");
    close FILE;

    # create/overwrite nexcsims.dr recording file
    open (DR_FILE, ">".$DATA_PATH."/Modified_data/nexcsims.dr");
    # Insert header declarations
    print  DR_FILE "#ifndef DR_GROUP_ID\n";
    print  DR_FILE "    #define DR_GROUP_ID sys.exec.record.num_group\n";
    print  DR_FILE "#else\n";
    print  DR_FILE "    DR_GROUP_ID -- ;\n";
    print  DR_FILE "#endif\n\n";
    print  DR_FILE "sys.exec.record.group[DR_GROUP_ID].name = \"$record_name\" ;\n";
    if ( $freq > 0.0 ) {
        print  DR_FILE "sys.exec.record.group[DR_GROUP_ID].cycle = $freq ;\n";
    }
    print  DR_FILE "sys.exec.record.group[DR_GROUP_ID].record = Yes ;\n";
    print  DR_FILE "sys.exec.record.group[DR_GROUP_ID].format = DR_Binary ;\n";
    close DR_FILE;

    # Create a new XML::Parser object, $parser 
    my $parser = XML::Parser->new(
        Handlers => {
            # 'Start' handler - references the start subroutine (hand-written below)
            Start=>\&start,
            # 'End' handler - reference the end subroutine (hand-written below)
            End=>\&end,
        }
    );
    $parser->parsefile($file);

    # Append footer to recording file
    open (DR_FILE, ">>".$DATA_PATH."/Modified_data/nexcsims.dr");
    print  DR_FILE "\nDR_GROUP_ID ++ ;\n";
    close DR_FILE;

    return $results ;
}

sub start {

    # Called by generate_data_files()
    my ( $expat, $element, %attrval ) = @_;

    my ( $i, $j, $k );
    my $dimension_counter = 0;
    my @array_of_arrays = ();
    my $pos = 1;

    # Search for <InputParameters> tag to build an input data file
    if ( $element eq "Parameter" and $element_stack[ -1 ] eq "InputParameters" ) {

        # Append variables to data file
        open (FILE, ">>".$DATA_PATH."/Modified_data/nexcsims.d");

        # Translate the NExIOM variable name to a local variable name
        my ($in_variable, @arrays) = find_sim_var( $attrval{name}, "in" ) ;
        # Determine if var is scalar, single dimension array, double (matrix), etc
        # If @arrays list is empty, then this variable is scalar
        $dimension_counter = @arrays;  

        for ( $i = 0;  $i < $dimension_counter;  $i++ ) {
            push @array_of_arrays, [1..$arrays[$i]];
        }

        $pos = 1;  # default array size
        my $iter = make_permutation(@array_of_arrays);
        while (my @elements = $iter->() ){
            print  FILE "$in_variable";
            if ($dimension_counter >= 1) {
                foreach (@elements) {
                    $pos = $_ - 1;  # decrease array position by 1 for C code
                    print  FILE "[$pos]";  # append array index to variable
                }
            }
            if( exists $attrval{units} ) {
                # Identify what units this parameter's value will be given in
                print  FILE " \{$attrval{units}\}";
            }
            # Retrieve the value being assigned to this parameter
            print  FILE " = $attrval{value};\n";
        }

        close FILE;

    # Search for <OutputParameters> tag to build a data recording file
    } elsif ( $element eq "Parameter" and $element_stack[ -1 ] eq "OutputParameters" ) {

        # Append variables to recording file
        open (DR_FILE, ">>".$DATA_PATH."/Modified_data/nexcsims.dr");
        
        # Translate the NExIOM variable name to a local variable name
        my ($out_variable, @arrays) = find_sim_var( $attrval{name}, "out" ) ;
        # Determine if var is scalar, single dimension array, double (matrix), etc
        # If @arrays list is empty, then this variable is scalar
        $dimension_counter = @arrays;  

        for ( $i = 0;  $i < $dimension_counter;  $i++ ) {
            # Create an array of integers from 1 to n,
            # then populate that array into an array list.

            # Example: given a multi-dimensional array that is of size 2 x 10 x ?,
            # produce this array list =>  ([1..2], [1..10], [1..?], etc... )

            push @array_of_arrays, [1..$arrays[$i]];
        }

        $pos = 1;  # default array size
        my $iter = make_permutation(@array_of_arrays);
        while (my @elements = $iter->() ){
            print  DR_FILE "sys.exec.record.group[DR_GROUP_ID].ref".
                    "[$record_index] = \"$out_variable";
            if ($dimension_counter >= 1) {
                foreach (@elements) {
                    $pos = $_ - 1;  # decrease array position by 1 for C code
                    print  DR_FILE "[$pos]";  # append array index to variable
                }
            }
            # End string with closed quote, semi-colon & newline
            print  DR_FILE "\" ;\n";  # write to data recording file
            $record_index++;
        }

        close DR_FILE;
    }

    push @element_stack, $element;
}

sub end {

    my ( $expat, $element ) = @_;

    pop @element_stack;
}

sub find_sim_var {

    # Use a mappping file to find which simulation variable
    # is equivalent to this nexiom input variable name.
    my $nexiom_variable = my $new_variable = shift;
    my $in_out = shift;
    my ($from, $to, @slots);

    if ((defined $in_out)  &&  ($in_out eq "out")) {
        open (MAP_FILE, $INCLUDE_PATH."/nexiom_output.map");
    } else {
        open (MAP_FILE, $INCLUDE_PATH."/nexiom_input.map");
    }

    while (<MAP_FILE>) {
        chomp;  # read file until another newline character is found

        # Copy values (assume data is comma delimited)
        ($from, $to, @slots) = split(",");
        $from = trim($from);  # remove whitespace
        $to = trim($to);  # remove whitespace
        # Values in the output mapping file are opposite/backwards
        if ((defined $in_out)  &&  ($in_out eq "out")) {
            # Swap from & to values
            ($from, $to) = ($to, $from);
        }
        foreach (@slots) {
            $_ = int(trim($_));  # save array demensions (if any)
        }

        # Search for the nexiom variable name
        if( $nexiom_variable eq $from ) {
            # Cross mapping found.  Rename to local simulation name.
            $new_variable = $to ;
            last;  # break out of loop
        } elsif( $nexiom_variable eq $to ) {
            # No cross mapping needed.  Leave variable name as is.
            $new_variable = $nexiom_variable ;
            last;  # break out of loop
        } else {
            # clear tmp values prior to parsing next line of MAP_FILE
            ($from, $to, $#slots) = ( "", "", -1);
        }
    }

    close (MAP_FILE);

    my @found_it = ($new_variable, @slots) ;
    return @found_it ;
}

sub make_permutation{
    my @refs = @_;
    my @arrayindexes = ();
    foreach (@refs){
        push @arrayindexes,[$_,0,$#{$_}];
    }

    return sub {
        return if $arrayindexes[0]->[1] > $arrayindexes[0]->[2];
        my @elements =  map { $_->[0]->[ $_->[1]] } @arrayindexes;
        # Check for out of bounds....
        $arrayindexes[$#arrayindexes]->[1]++;
        for (my $i = $#arrayindexes; $i > 0; $i--) {
            if ($arrayindexes[$i]->[1] > $arrayindexes[$i]->[2]) {
                $arrayindexes[$i]->[1] = 0;
                $arrayindexes[$i-1]->[1]++;
            } else {
                last;
            }
        }
        return @elements;

    };
}

sub trim($)
{
    # Remove whitespaces
    my $string = $_[0];
    $string =~ s/^\s+//;
    $string =~ s/\s+$//;
    return $string;
}