Commit Graph

3624 Commits

Author SHA1 Message Date
Johannes Schindelin
6159f5cd3c Support Logger#log(Level,String,Object)
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-06 09:07:58 -06:00
Johannes Schindelin
874bf4ef4c Initialize Logger instances to the 'INFO' level by default
... otherwise, logging would throw an exception when trying to
determine whether the current level allows the message to be logged.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-06 09:07:58 -06:00
Johannes Schindelin
dba8d39e63 Implement Class#getDeclaredClasses
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-06 09:07:58 -06:00
Simon Ochsenreither
5827c450c9 Adds separatorChar and pathSeparatorChar fields to File ...
... and fixes a bug which caused path.separator to always return null.
2013-11-06 14:05:25 +01:00
Johannes Schindelin
26c90170a6 Add a minimal FilterInputStream
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-05 14:36:16 -06:00
Joshua Warner
da69b735f4 Merge branch 'addzip' of git://github.com/CUBoulderBoy/avian into CUBoulderBoy-addzip 2013-11-04 17:38:27 -07:00
Joshua Warner
d128838617 Merge pull request #92 from dscho/collections
Various improvements regarding Collections
2013-11-04 16:33:06 -08:00
Joshua Warner
ac32e0de39 Merge pull request #91 from dscho/intro-sort
Replace Arrays.sort() with an efficient sort algorithm
2013-11-04 16:31:08 -08:00
Joshua Warner
790fcff73e Merge pull request #89 from dscho/get-resources
Support ClassLoader#getResources with multiple class path elements
2013-11-04 16:29:40 -08:00
Joshua Warner
9080b462b6 fix jni_md.h not found 10.9 problem 2013-11-04 17:26:57 -07:00
Johannes Schindelin
002b0db43a Do not report jar: URLs as jar://file:...
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 16:55:07 -06:00
Johannes Schindelin
a2feec0bab Add a pseudo-integration test for getResources()
This adds an extra class path element to the VM running the unit tests,
writes files with identical file names into both directories and then
verifies that SystemClassLoader#getResources can find them.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 16:53:02 -06:00
Johannes Schindelin
167688eabd Teach SystemClassLoader#getResources to not stop at the first match
The getResources method can be used to find all matches in the class
path for a given path, e.g. to seek out all the META-INF/MANIFEST.MF
files contained in all of the .jar files in the class path.

We just taught the findResources() method to return all matches (rather
than only the first), so let's use that method to get all the matches
from the current class loader's class path elements.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 16:49:34 -06:00
Johannes Schindelin
0602d4a447 Consider all class path elements in SystemClassLoader#findResources
The findResources method is supposed to enumerate all the class path
elements' matching paths' URLs, but we used to stop at the first one.

While this is good enough when the system class path contains only a
single .jar file, since b88438d2(sketch of JAR support in Finder)
supports more than a single .jar file in the class path.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 16:49:31 -06:00
Johannes Schindelin
1864180ea7 Teach Finder to find more than just the first matching element
When the system class path contains more than one .jar, it is quite
concievable that, say, 'META-INF/MANIFEST.MF' can be found in multiple
class path elements.

This commit teaches the working horse of class path inspection, the
Finder class, how to continue the search at a given state.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 16:44:52 -06:00
Johannes Schindelin
7fe3979280 Implement LinkedHashSet
This implementation is intentionally simple. If and when the need arises,
we can always implement a more performant version.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 15:11:19 -06:00
Johannes Schindelin
58ea1442fd Implement LinkedHashMap
This implementation is intentionally simple. If and when the need arises,
we can always implement a more performant version.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 15:11:19 -06:00
Johannes Schindelin
c023bd8654 Implement TreeSet#descendingIterator
If need be, this functionality can be sped up by implementing a
descending iterator on the tree without copying it into an ArrayList.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 15:11:19 -06:00
Johannes Schindelin
1ed90c38ab Implement rest of the Arrays#fill family
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 15:11:19 -06:00
Johannes Schindelin
6a81623690 Implement the Arrays#copyOf family
... as introduced in Java 6.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 15:11:00 -06:00
Johannes Schindelin
46a55bd024 Implement ArrayList#ensureCapacity
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 14:33:25 -06:00
Johannes Schindelin
eab3b8e448 Implement Collections#reverse
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 14:33:25 -06:00
Johannes Schindelin
a61bcf824f Implement Collections#binarySearch
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 14:33:25 -06:00
Johannes Schindelin
d37b5ada37 Implement Collections#sort
This is really a verbatim translation of Arrays#sort.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 12:08:22 -06:00
Johannes Schindelin
605701e40a Replace Arrays.sort() with an efficient sort algorithm
This change reuses the existing insertion sort (which was previously what
Arrays.sort() executed) in a full intro sort pipeline.

The implementation is based on the Musser paper on intro sort (Musser,
David R. "Introspective sorting and selection algorithms." Softw., Pract.
Exper. 27.8 (1997): 983-993.) and Wikipedia's current description of the
heap sort: http://en.wikipedia.org/wiki/Heapsort.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-11-04 00:27:04 -06:00
Joshua Warner
8b60a32f11 Merge pull request #88 from g-nix/master
Bugfixes for Mac OS X, etc.
2013-10-31 06:33:26 -07:00
Geoff Nixon
69ea1f5721 Bugfixes for Mac OS X, etc. 2013-10-31 01:35:56 -07:00
Joshua Warner
c2203c6815 Merge pull request #87 from dscho/beanshell
Support running Beanshell's bsh.Interpreter class
2013-10-25 14:01:24 -07:00
Johannes Schindelin
6c46fe3f1a Make Vector a Cloneable
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
056c65947e Add Collections#singletonList
This is a very dumb implementation that wastes space and time by
constructing a full-blown ArrayList as backend. However, it is
better to have a dumb implementation than none at all, and we can
always do something about the performance when, and if, that should
become necessary.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
86c735e649 Add Collections#synchronizedSet
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
526dd574d9 Add the Method#isVarArgs method
Required by bleeding-edge Beanshell...

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
0e3e719dd6 Add the Boolean#getBoolean method
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
95fcc9ac8e Test the newly-introduced Integer#decode method
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
d04cda30ca Add the Integer#decode method
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
c1ec6020a6 Verify that String#lastIndexOf handles large fromIndex correctly
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
2ff0178da4 Adjust fromIndex in String#lastIndexOf if necessary
If fromIndex 'is greater than or equal to the length of this string,
it has the same effect as if it were equal to one less than the length
of the string':

http://docs.oracle.com/javase/6/docs/api/java/lang/String.html#lastIndexOf%28int,%20int%29

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
6f64e3aaab Verify that two-dimensional object arrays have the correct component type
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:32:33 -05:00
Johannes Schindelin
0ca8601777 Fix getClass().getComponentType() for higher-dimensional arrays
When creating an object array with more than two dimensions, the
component type was erroneously set to the base type, not the array
type of one less dimension.

This prevented Collection<Class[]>#toArray(Class[][]) from working
properly.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-25 15:31:54 -05:00
Joshua Warner
187d5dfde9 fix darwin build 2013-10-24 14:07:53 -06:00
Joshua Warner
b20dcd268c Merge pull request #85 from dscho/simple-regex
Simple regex
2013-10-21 13:30:57 -07:00
Johannes Schindelin
359f99c0f7 Add a unit test for regular expressions
We do not really support regular expressions yet, but we do support
trivial patterns including ones with escaped characters. Let's make sure
that that works as advertised.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-21 13:34:33 -05:00
Johannes Schindelin
728473e9ad Support escaped octal and hexadecimal characters in regular expressions
In the previous commit, we did not support characters in regular
expressions specified via \0..., \x... or \u... yet. This is a bit more
involved, therefore support for them is added in its own commit.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-21 13:34:33 -05:00
Johannes Schindelin
f55ac46602 Support trivial regular expressions with special escaped characters
When a regular expression contains escaped characters such as the
backslash, it is actually still a literal string. So let's support the
trivially-escaped characters, too, that are documented in

	http://docs.oracle.com/javase/7/docs/api/java/util/regex/Pattern.html

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-21 12:00:17 -05:00
Joshua Warner
02e433ce61 Merge pull request #84 from dscho/random-access-file
Write support for the RandomAccessFile
2013-10-21 09:38:44 -07:00
Joshua Warner
e485a468f0 Merge pull request #82 from dscho/dates
Implement date parsing / formatting
2013-10-21 09:36:46 -07:00
Johannes Schindelin
3681ae508e Implement a rudimentary RandomAccessFile#getChannel
This implementation is by no means intended to be complete, just enough to
support running http://http://loci.wisc.edu/software/bio-formats's
loci.formats.tools.ImageConverter tool.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-21 10:59:59 -05:00
Johannes Schindelin
3a67f81b50 Add the FileChannel class
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-21 10:59:59 -05:00
Johannes Schindelin
caec6eba67 Add the BufferUnderflowException
Pre-compiled code might expect the class to exist...

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-21 10:59:59 -05:00
Johannes Schindelin
4f83f8dd98 ByteBuffer: add missing order() methods
Avian's ByteBuffer implementation is actually fixed to big endian. So
let's throw an exception if the user tries to change that.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
2013-10-21 10:59:59 -05:00