cleaned up commented out code and unsused files

package/extras/aca/tomcat-mysql-hirs.te

@@ -1,13 +0,0 @@
-
-module tomcat-mysql-hirs 1.0;
-
-require {
-	type mysqld_port_t;
-	type tomcat_t;
-	class tcp_socket name_connect;
-}
-
-#============= tomcat_t ==============
-
-#!!!! This avc is allowed in the current policy
-allow tomcat_t mysqld_port_t:tcp_socket name_connect;

package/scripts/aca/aca_bootRun.sh

@@ -68,7 +68,8 @@ keyStore="$CLIENT_DB_P12" "
 WEB_TLS_PARAMS="--server.ssl.key-store-password=$hirs_pki_password \
 --server.ssl.trust-store-password=$hirs_pki_password"
 
-echo "--args=\"$CONNECTOR_PARAMS $WEB_TLS_PARAMS\""
+# uncomment to show spring boot and hibernate properties used as gradle argumanets
+#echo "--args=\"$CONNECTOR_PARAMS $WEB_TLS_PARAMS\""
 
 if [ "$USE_WAR" == "war" ]; then
     echo "Booting the ACA from a $USE_WAR file..."

package/scripts/aca/aca_setup.sh

@@ -1,14 +1,11 @@
 #!/bin/bash
 # Capture location of the script to allow from invocation from any location
 SCRIPT_DIR=$( dirname -- "$( readlink -f -- "$0"; )"; )
-#SPRING_PROP_FILE='../../../HIRS_AttestationCAPortal/src/main/resources/application.properties'
 HIRS_CONF_DIR=/etc/hirs/aca
 LOG_FILE_NAME="hirs_aca_install_"$(date +%Y-%m-%d).log 
 LOG_DIR="/var/log/hirs/"
 LOG_FILE="$LOG_DIR$LOG_FILE_NAME"
 HIRS_PROP_DIR="/opt/hirs/default-properties"
-#COMP_JSON='../../../HIRS_AttestationCA/src/main/resources/component-class.json'
-#VENDOR_TABLE='../../../HIRS_AttestationCA/src/main/resources/vendor-table.json'
 
 help () {
   echo "  Setup script for the HIRS ACA"
@@ -62,12 +59,6 @@ mkdir -p $HIRS_CONF_DIR $LOG_DIR $HIRS_PROP_DIR
 
 echo "ACA setup log file is $LOG_FILE"
 
-#if [ -z $HIRS_MYSQL_ROOT_PWD ]; then 
-#    echo "HIRS_MYSQL_ROOT_PWD is not set, using locally generated mysql root password"
-#  else 
-#    echo "HIRS_MYSQL_ROOT_PWD is set, using previously set mysql root password"
-#fi
-
 if [ "$EUID" -ne 0 ]
       then echo "This script requires root.  Please run as root"
       exit 1
@@ -88,13 +79,6 @@ if [ -z $HIRS_PKI_PWD ]; then
    echo "Using system supplied password for the PKI key password" | tee -a "$LOG_FILE"
 fi
 
-# Copy HIRS configuration and data files if not a package install
-#if [ -f $SPRING_PROP_FILE ]; then
-#   cp -n $SPRING_PROP_FILE $HIRS_CONF_DIR/.
-#   cp -n $COMP_JSON $HIRS_PROP_DIR/.
-#   cp -n $VENDOR_TABLE $HIRS_PROP_DIR/.
-#fi
-
 if [ -z "${ARG_SKIP_PKI}" ]; then
    sh ../pki/pki_setup.sh $LOG_FILE $PKI_PASS $ARG_UNATTEND
    if [ $? -eq 0 ]; then 

package/scripts/db/db_create.sh

@@ -9,7 +9,6 @@
 
 LOG_FILE=$1
 UNATTENDED=$2
-# LOG_FILE="/var/log/hirs/hirs_aca_install_$(date +%Y-%m-%d).log"
 # Capture location of the script to allow from invocation from any location
 SCRIPT_DIR=$( dirname -- "$( readlink -f -- "$0"; )"; )
 SPRING_PROP_FILE="/etc/hirs/aca/application.properties"
@@ -46,7 +45,7 @@ check_mysql_root_pwd () {
 	 echo "Using randomly generated password for the DB admin" | tee -a "$LOG_FILE"
 	 DB_ADMIN_PWD=$(head -c 64 /dev/urandom | md5sum | tr -dc 'a-zA-Z0-9')
 	 echo "DB Admin will be set to $DB_ADMIN_PWD , please make note for next mysql use."
-     # Check i UNATTENDED flag set m if not then prompt user for permission ot store mysql root password
+     # Check UNATTENDED flag set m if not then prompt user for permission ot store mysql root password
 	 if [ -z $UNATTENDED ]; then
 	   read -p "Do you wish to save this password to the aca.properties file? " confirm
 	   if [[ $confirm == [yY] || $confirm == [yY][eE][sS] ]]; then

package/scripts/db/db_drop.sh

@@ -29,7 +29,6 @@ fi
 echo "dropping hirs_db database"
 
 if pgrep  mysqld >/dev/null 2>&1; then
-   # mysql -u "root" --password=$DB_ADMIN_PWD < $MYSQL_DIR/db_drop.sql
      mysql -u root --password=$DB_ADMIN_PWD  -e "FLUSH HOSTS; FLUSH LOGS; FLUSH STATUS; FLUSH PRIVILEGES; FLUSH USER_RESOURCES"
      mysql -u root --password=$DB_ADMIN_PWD -e "DROP USER 'hirs_db'@'localhost';"
      mysql -u root --password=$DB_ADMIN_PWD -e "DROP DATABASE IF EXISTS hirs_db;"